All functions

add_theme()

Add NOAA formatting to figure or table

create_rda()

Create the rda package for a plot or table

export_rda()

Export a figure or table to rda

extract_caps_alttext()

Extract captions and alternative texts

filter_data()

Filter data for input into aesthetics for ggplot2

html_all_figs_tables()

Make an html file with all figures and tables

plot_aa()

Create "at-age" plot

plot_abundance_at_age()

Plot Abundance (or Numbers) at Age (AAA or NAA)

plot_biomass()

Plot Total Biomass

plot_biomass_at_age()

Plot Total Biomass at Age (BAA)

plot_catch_comp()

Plot catch composition

plot_error()

Create plot with error

plot_fishing_mortality()

Plot fishing mortality timeseries

plot_indices()

Plot Index of Abundance

plot_landings()

Plot observed landings

plot_natural_mortality()

Plot natural mortality (M) at age

plot_recruitment()

Plot Recruitment

plot_recruitment_deviations()

Plot Recruitment Deviations

plot_spawn_recruitment()

Plot Spawn-Recruit Relationship

plot_spawning_biomass()

Plot spawning biomass (SB)

plot_timeseries()

Plot time series trends

process_data()

Post processing of filtered data

reference_line()

Preformatted reference line

save_all_plots()

Export all figures and tables

theme_noaa()

Add NOAA theming to ggplot2 object. The palette is from the 'viridis' package, which contains palettes distinguishable by those with color vision deficiency.

write_captions()

Write captions and alternative text